hi
i have an aligmenet file which contains 3 species generated from clustalx
AAAACGT Alpha
AAA-CGT Beta
AAAAGGT Gamma
i already sliced the aligment using the predefined indexing in biopython align[:,:4]
but now when i print the result i get:
AAAA Alpha
AAA- Beta
AAAA Gamma
the questions is: how can i get only the sub-aligmenet as without the species names(like a multiple aligment object without species names) e.g something like that:
AAAA
AAA-
AAAA
i tried : align[:,:4].seq
but it did not worked.
any help would be appreciated
thank you